alterlab-ieu/alterlab-academic-skills/alterlab-causal-inference
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Estimates causal effects from observational and quasi-experimental data — difference-in-differences, instrumental variables, regression discontinuity, panel fixed effects, propensity-score / doubly-robust methods, and heterogeneous treatment effects (CATE) — using the verified Python stack: statsmodels and linearmodels (PanelOLS, IV2SLS), pyfixest (feols, event studies, Sun-Abraham, did2s), DoWhy (identify -> estimate -> refute), EconML (LinearDML, CausalForestDML, DRLearner), and rdrobust for…
Install
npx vskill@latest install alterlab-ieu/alterlab-academic-skills/alterlab-causal-inferenceSKILL.md
Causal Inference — Name the Assumption, Estimate, Then Try to Break It
Skill type: ANALYSIS MODULE. Estimates a causal effect from data that was not fully randomized. The discipline is not the estimator — it is the identifying assumption the estimator relies on, stated before the fit and stress-tested after. If the design is not yet fixed, that belongs upstream in alterlab-ssci-design-gate.
Core Mission
When to Use This Skill
- "Estimate the effect with difference-in-differences / an event study."
- "I have an instrument for the treatment — run instrumental variables / 2SLS."
- "There's a cutoff score — run a regression discontinuity."
- "Panel data with unit and time fixed effects — estimate the treatment effect."
- "Give me the heterogeneous treatment effect / CATE across subgroups."
Does NOT Trigger
| The request is really about… | Route to | Why not this skill | |
|---|---|---|---|
| Choosing the design & its identifying assumption | alterlab-ssci-design-gate | Design routing precedes estimation. | |
| Plain OLS / descriptive or inferential stats (no causal identification) | alterlab-statistical-analysis / alterlab-statsmodels | No treatment-effect identification problem. | |
| Latent-variable / SEM / factor structure | alterlab-sem-psychometrics | Measurement model, not treatment effect. | |
| Auditing whether the final claim is licensed | alterlab-ssci-inference-gate | Claim audit, downstream. |
Estimator map (verified libraries, pinned)
| Design | Identifying assumption | Estimator (verified API) | ||
|---|---|---|---|---|
| DiD / event study | parallel trends | pyfixest (v0.60): `pf.feols("y ~ i(year, treat, ref=2018) | unit + year", df) (ref= must be a keyword), pf.event_study(...), pf.did2s(...); or statsmodels smf.ols("y ~ treat*post").fit(cov_type='cluster', cov_kwds={'groups': df.unit}). Staggered adoption → pf.event_study(df, yname, idname, tname, gname, estimator="saturated") (cohort × event-time; .aggregate() applies Sun-Abraham weights) or estimator="did2s". sunab() is R fixest syntax — pyfixest has no sunab()`. | |
| Panel fixed effects | no time-varying confounders | linearmodels (v7): PanelOLS.from_formula("y ~ 1 + x + EntityEffects + TimeEffects", panel).fit(cov_type='clustered', cluster_entity=True). | ||
| Instrumental variables | exclusion restriction + relevance | linearmodels IV2SLS.from_formula("y ~ 1 + exog + [treat ~ z1 + z2]", df).fit(); check first-stage F (weak instrument). | ||
| Regression discontinuity | continuity at the cutoff (no sorting) | rdrobust (v2): rdrobust(y, x, c=cutoff), rdbwselect, rdplot; McCrary/density check for manipulation. | ||
| Selection-on-observables | conditional ignorability | DoWhy (v0.14): CausalModel(df, treatment, outcome, graph).identify_effect() → estimate_effect(method_name="backdoor.propensity_score_matching") → refute_estimate(..., method_name="random_common_cause"). | ||
| Heterogeneous effects (CATE) | (as above) + overlap | EconML (v0.17): LinearDML() / CausalForestDML() .fit(Y, T, X=X, W=W) then .effect(X). |
A stdlib router that maps the design to the estimator + its assumption + the verified call: scripts/estimator_router.py. Fuller worked patterns and diagnostics: references/estimators.md.
The mandatory two steps around every estimate
- Before: write the identifying assumption in one sentence and how you will defend it
(pre-trend plot for DiD, first-stage F and an exclusion argument for IV, density/McCrary test for RDD, overlap/common-support for PSM). No assumption, no causal estimate.
- After: run a refutation/robustness check —
DoWhy.refute_estimate(random common cause,
placebo treatment, data subset), a pre-trend/event-study plot, a bandwidth-sensitivity for RDD, or an E-value / sensitivity analysis for unmeasured confounding. Report it next to the estimate.
Output Template
Quality Standards
- Report effect sizes with confidence intervals and the SE structure (clustered where relevant).
- Never present a causal estimate without its diagnostic and at least one refutation.
- Hand the final estimate + assumption to
alterlab-ssci-inference-gatefor the claim audit. - No fabricated flags: every call above is verified against the library's current docs; if a
flag is unverified in your installed version, check --help/docs, do not guess.
References
references/estimators.md— per-design worked calls, diagnostics, and refutation menu.scripts/estimator_router.py— stdlib design→estimator+assumption router.
Part of the AlterLab Academic Skills suite.
Security
- Security scanPassed, 100 of 100Pattern checks on the skill's files.
- Model reviewNot runA model review is scheduled for the next rescan.
Quality evaluation
- Task evaluationNot runNo evaluation yet. Run one in Skill Studio.
Source
- SKILL.md in the repositoryCheckingskills/social-science-workflow/alterlab-causal-inference/SKILL.md
Popularity
- Repository stars
- 69
- Repository forks
- 14
- 7-day trend score
- 21
Stars and forks are for the whole GitHub repository, not this skill alone. Not refreshed yet.
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