anthropics/knowledge-work-plugins/bio-research-single-cell-rna-qc

anthropics·AI/ML·anthropics/knowledge-work-plugins·bio-research·bio-research/skills/single-cell-rna-qc/SKILL.md ↗·Updated Mar 10, 2026

Performs quality control on single-cell RNA-seq data (.h5ad or .h5 files) using scverse best practices with MAD-based filtering and comprehensive visualizations. Use when users request QC analysis, filtering low-quality cells, assessing data quality, or following scverse/scanpy best practices for single-cell analysis.

vendoranthropics

Install

# npm
$ npx vskill install anthropics/knowledge-work-plugins/bio-research-single-cell-rna-qc

# bun
$ bunx vskill install anthropics/knowledge-work-plugins/bio-research-single-cell-rna-qc

# pnpm
$ pnpx vskill install anthropics/knowledge-work-plugins/bio-research-single-cell-rna-qc

# yarn
$ yarn dlx vskill install anthropics/knowledge-work-plugins/bio-research-single-cell-rna-qc

# alternative
$ npx vskill install anthropics/knowledge-work-plugins --skill bio-research-single-cell-rna-qc

── Security ────────────────────────────────────────

Tier 1PASS 100/100Tier 2PASSCertified Feb 26, 2026View full security report →

── Quality Evaluation ──────────────────────────────

QualityWARN 53/100Marginal2 runsEvaluated 9d ago

View eval results →

Popularity

8.3kstars871forks457d trend

5d ago

Works with

Works with all 39 vskill-compatible agents

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